Wetware World

Example package

NeuronTile, MEA-ready cortical culture

A 24 by 24 mm neural culture on a microelectrode array, built and tested. Two iPSC-derived populations, three interfaces, five criteria.

File
neurontile-asbuilt.wwd
Package size
4375 B
Component kind
neural_culture
Design revision
0.4.0

What it describes

A 24 by 24 mm neural culture on a microelectrode array, built and tested. Two iPSC-derived populations, three interfaces, five criteria.

Readings

  • The same field, criterion and result machinery applies to a component that is not printed and has no bulk geometry.
  • Two populations are declared with distinct biological roles, both from Homo sapiens.
  • Electrical recording, electrical stimulation and optical imaging access are separate interfaces on one component.
  • The yield statement records 8 units tested and 7 meeting NT-001.
  • The provenance graph holds 22 entities and 41 edges, including split and pooling activities.

Archive entries

Every entry, with its manifest role.

ZIP entries
EntryBytesRoleMedia type
mimetype23(package identity)text/plain
wwd/manifest.json864manifestapplication/json
wwd/design.json8595designapplication/vnd.wwd.design+json
wwd/results.json9659measured_result_dataapplication/vnd.wwd.results+json

Component

Identity, frame, dimensions and biology.

NeuronTile, MEA-ready cortical culture
Identifiercomponent/neuron-tile
Kindneural_culture
Dimensionslength 24 mm, width 24 mm, thickness 0.15 mm
Frameright-handed, axes x y z, units mm, origin substrate center
Validity windowdays_in_vitro 21 to 42
Geometrynot carried in this package
Populations
RoleCell typeSpeciesDerivation
primary glutamatergic neuron CL:0000679 Homo sapiens NCBITaxon:9606 ipsc_derived
support astrocyte CL:0000127 Homo sapiens NCBITaxon:9606 ipsc_derived
Fields
PropertyCausal roleProvenanceValue
wwd:seeding_density_areal control designed 1500 cells/mm2 · imposed_by protocol/plating#step-3
wwd:medium_formulation control designed 1 1 · imposed_by protocol/feeding#schedule
wwd:active_electrode_fraction response designed 0.80 1
wwd:mean_firing_rate response designed 2.5 Hz
wwd:network_burst_rate response designed 0.15 Hz
Interfaces
IdentifierModalityRole
iface/meaelectricalrecording
iface/stimelectricalstimulation
iface/opticalopticalimaging_access
Regions
IdentifierKind
region/active-culturewhole_component
region/electrode-arraygeometry_subset

Acceptance criteria

Measurand, statistic, comparator, limit and method, as written in the design document.

Criteria
TagTitleMeasurand StatisticLimit CriticalityAxis Methodn
NT-001 Active electrode fraction active_electrode_fraction proportion >= 0.8 1 critical response WWD-MEA-001 not stated
NT-002 Mean firing rate floor mean_firing_rate median >= 0.1 Hz critical response WWD-MEA-001 not stated
NT-003 Network burst rate network_burst_rate median >= 0.0167 Hz critical response WWD-BURST-001 not stated
NT-004 Network burst participation electrodes_in_network_burst proportion >= 0.25 1 critical response WWD-BURST-001 not stated
NT-006 Culture age at ship days_in_vitro value range 28 to 35 d critical control WWD-DIV-001 not stated

Results document

Realization, measured results, yield and lineage.

Realization
Identifier schemelocal
Design revision tested0.4.0
Yield7 of 8 units meeting NT-001
Context recordedwwd:source_line = CVCL_1E52, wwd:days_in_vitro = 28 1
Provenance graph22 entities, 41 edges
Activity kindsdifferentiation, expansion, pooling, split
Measured results
CriterionStatusValueStatisticn observedProvenanceCausal role
NT-001 pass 0.87 1 proportion 60 measured response
NT-002 pass 3.1 Hz median 52 measured response
NT-003 pass 0.11 Hz median not stated measured response
NT-004 pass 0.62 1 proportion 60 measured response
NT-006 pass 30 d value not stated measured control

A consumer recomputes every verdict from the limit, the statistic and the observed value. The recorded status is not trusted.